scripts_ucsfchimera

Hi guys,

this is a list of scripts you may find useful.

- newres.py argument1 argument2

provide with a given residue name to a given selection of atoms. argument1 corresponds to a maximum 4 letter residue name and argument2 will be the residue number

- expbnd.py

expand the current selection of atoms one bond further from those of the actual selection.

Bare in mind that you can:

- call your script in the command line by running the runscript command:

runscript directory_of_the_script/name_of_script.py arguments

- generate an alias (that will pop in the aliases menu)

alias ^name_alias runscript directory_of_the_script/name_of_script.py $1 $2 

where 1 and 2 would correspond to arguments to provide to the script

 

Good luck

JD

 

 

Campus d'excel·lència internacional U A B